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Duplicate gene pair information
Duplicate gene pair:AT1G04940-AT1G04945
Species:Arabidopsis
Duplication type:TD
Function (paralog1):translocon at the inner envelope membrane of chloroplasts 20
Function (paralog2):HIT-type Zinc finger family protein

Regulation information
Data set:seedling_Juntawong_2013
Log2 RF fold difference:-4.4336857878775
Log2 mRNA fold difference:-4.0013172602247
Log2 TE fold difference:-0.46732199519201
Sequences
Protein sequence

MITGYSTPSAHVLMSSRAFKSSSYRAAAGQTQHYLARSSLPVVKNSWGSPPSPFNELPRV
SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKP
QWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFF
VAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFA
YLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD

MITGYSTPSAHVLMSSRAFKSSSYRAAAGQTQHYLARSSLPVVKNSWGSPPSPFNELPRV
SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKP
QWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFF
VAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFA
YLFTVLESIRCALADSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTD
VVPLSKFDDNLLLSDYNMLEETKRVAESALRRRSQLCKNHYSYKLPYLLKSLQSAAYSRR
TKLWYLPSGMLKRENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNH
LKPGPWIHKLKPFCDVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVI
HVYLPSQSYEFKVIKDFNTTPNPNDSLYDGHGCTNGITFREEEIEEDDIDSFEPEVLGLM
KQMNYNPCLRVSEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMN
PGDYFNFECEFAKGLDSDDNCNLQNLDTDFIADGLDLEEGEIVE

Other information
Ka divergence:1KaKs divergence:-0.292532
GC content 1 (%):46GC content 2 (%):43GC content divergence:-0.034
Length 1 (bp):825Length 2 (bp):1935Length divergence:0.402
MFE 1 (kcal):-264.18MFE 2 (kcal):-570.54MFE divergence0.367