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Duplicate gene pair information
Duplicate gene pair:AT1G06150-AT2G31280
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Function (paralog2):conserved peptide upstream open reading frame 7

Regulation information
Data set:seedling_Juntawong_2013
Log2 RF fold difference:-0.32404307809812
Log2 mRNA fold difference:0.52958022590963
Log2 TE fold difference:-0.84074035179322
Sequences
Protein sequence

MGYTLQQILRSICSNTDWNYAVFWKLNHHSPMVLTLEDVYCVNHERGLMPESLHGGRHAH
DPLGLAVAKMSYHVHSLGEGIVGQVAISGQHQWIFSEYLNDSHSTLQVHNGWESQISAGI
KTILIVAVGSCGVVQLGSLCKVEEDPALVTHIRHLFLALTDPLADHASNLMQCDINSPSD
RPKIPSKCLHEASPDFSGEFDKAMDMEGLNIVSQNTSNRSNDLPYNFTPTYFHMERTAQV
IGGLEAVQPSMFGSNDCVTSGFSVGVVDTKHKNQVDISDMSKVIYDEETGGYRYSRELDP
NFQHYSRNHVRNSGGTSALAMESDRLKAGSSYPQLDSTVLTALKTDKDYSRRNEVFQPSE
SQGSIFVKDTEHRQEEKSESSQLDALTASLCSFSGSELLEALGPAFSKTSTDYGELAKFE
SAAAIRRTNDMSHSHLTFESSSENLLDAVVASMSNGDGNVRREISSSRSTQSLLTTAEMA
QAEPFGHNKQNIVSTVDSVISQPPLADGLIQQNPSNICGAFSSIGFSSTCLSSSSDQFPT
SLEIPKKNKKRAKPGESSRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLECTIKHMLF
LQSVSQHADKLTKSASSKMQHKDTGTLGISSTEQGSSWAVEIGGHLQVCSIMVENLDKEG
VMLIEMLCEECSHFLEIANVIRSLELIILRGTTEKQGEKTWICFVVEGQNNKVMHRMDIL
WSLVQIFQPKATNSLHLYRQSQILYMNAFANVHSLRVPSHHLRDFSASLSLAPPNLKKII
KQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYN
ALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGF
GFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQ
MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF
YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC
GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVF
TACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPN
AVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGR
MRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETEN
VY

MGSTSQEILKSFCFNTDWDYAVFWQLNHRGSRMVLTLEDAYYDHHGTNMHGAHDPLGLAV
AKMSYHVYSLGEGIVGQVAVSGEHQWVFPENYNNCNSAFEFHNVWESQISAGIKTILVVA
VGPCGVVQLGSLCKVNEDVNFVNHIRHLFLALRDPLADHAANLRQCNMNNSLCLPKMPSE
GLHAEAFPDCSGEVDKAMDVEESNILTQYKTRRSDSMPYNTPSSCLVMEKAAQVVGGREV
VQGSTCGSYSGVTFGFPVDLVGAKHENQVGTNIIRDAPHVGMTSGCKDSRDLDPNLHLYM
KNHVLNDTSTSALAIEAERLITSQSYPRLDSTFQATSRTDKESSYHNEVFQLSENQGNKY
IKETERMLGRNCESSQFDALISSGYTFAGSELLEALGSAFKQTNTGQEELLKSEHGSTMR
PTDDMSHSQLTFDPGPENLLDAVVANVCQRDGNARDDMMSSRSVQSLLTNMELAEPSGQK
KHNIVNPINSAMNQPPMAEVDTQQNSSDICGAFSSIGFSSTYPSSSSDQFQTSLDIPKKN
KKRAKPGESSRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQNVTKHA
EKLSKSANEKMQQKETGMQGSSCAVEVGGHLQVSSIIVENLNKQGMVLIEMLCEECGHFL
EIANVIRSLDLVILRGFTETQGEKTWICFVTEVGSRITQFMKEIPKQIKSQNSKVMQRMD
ILWSLVQIFQPKANEKG

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Other information
Ka divergence:-0.0303504KaKs divergence:-0.145788
GC content 1 (%):42GC content 2 (%):42GC content divergence:0
Length 1 (bp):3969Length 2 (bp):2214Length divergence:-0.284
MFE 1 (kcal):-1195.91MFE 2 (kcal):-642.64MFE divergence-0.301