Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT1G16340-AT1G79500
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):Aldolase superfamily protein
Function (paralog2):Aldolase-type TIM barrel family protein

Regulation information
Data set:leaf_Lukoszek_2016
Log2 RF fold difference:0.97814612633202
Log2 mRNA fold difference:0.6695951977188
Log2 TE fold difference:0.20778596060358
Sequences
Protein sequence

MANSASLLYDQLKVAEPFFLLAGPNVIESEEHVLRMAKSIKDISTKYVLGLPLVFKSSFD
KANRTSSKSFRGPGMAEGLKILEKVKVAFDLPIVTDVHESSQCEAVGKVADIIQIPAFLC
RQTDLLVAAAQSGKIINIKKGQFCGHSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIV
DPRNLEWMREADCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGI
FMEVHDDPLNAPVDGPTQWPLRHLEELLEELIAIASVTKGKQQFQIDLTPYRD

MAKHIKDISTKVGLPLVFKSSFDKANRTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDV
HESSQCEAVGKVADIIQIPAFLCRQTDLLVAAAQTGKIINIKKGQFCAPSVMENSAEKIR
LAGNPNVMVCERGTMFGYNDLIVDPRNFEWMREANCPVVADITHSLQQPAGKKLDGGGVA
SGGLRELIPCIARTAVAVGVDGIFMEVHDDPLSAPVDGPTQWPLRHLEELLEELIAIAIL
TLLFRRGLQKGSSGFKSTLHPTVIKIKGSVIASFHKFASTIPLSRFSLSRKRNRAEKADV
RKKMSFEKAQNPALGFNLETWNFYQLANSRERSQND

Other information
Ka divergence:0.103851KaKs divergence:0.241332
GC content 1 (%):44GC content 2 (%):43GC content divergence:-0.011
Length 1 (bp):882Length 2 (bp):1011Length divergence:0.068
MFE 1 (kcal):-256.1MFE 2 (kcal):-298.32MFE divergence0.076