Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT1G33260-AT4G10390
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):Protein kinase superfamily protein
Function (paralog2):Protein kinase superfamily protein

Regulation information
Data set:seedling-stress_Juntawong_2013
Log2 RF fold difference:-1.1033035576115
Log2 mRNA fold difference:-0.57769256309211
Log2 TE fold difference:-0.5059066406938
Sequences
Protein sequence

MSCFLSCVRFETTTDNNKPTSTESGSVSGVTCYTWDDVESLTSNFSRLIGTGGYSSIYLA
RVSGSINAALKVHVSSHRLYQVFRSELEILLRLQHPHIVKLLGYFDDSEESGALLLEYLP
QGNLQEKLNRNSKQVLPWRNRTAIAFQVAQAIEHIHEKCSPQIVHGDIKSSNILLDKHFN
SKLCDFGSAKVGFSSMVQPSKTTSTMSPRSKQVMMIGSPGYTDPHYLRTGIASKKMDMYG
FGVVVLELVSGKEAVSSERGEMLVHSTASLIHEILDSNGDIGEEKVRQFLDPRLSRDGSI
DLEEVKTMLRVAAFCLRSPPSLRPSASQVVQTLNKKIPSLSFLGCGKKE

MACFLNCVRFDVSKTITDKPTSQGSGVTCYNSWDDVETLTSNFSRLIGSGGYSSIYMARF
SGSDKAALKVHVSSHRLYQVFRLELDILLRLQHPNIVKLLGYFDDSEENGALLLEYLPQG
NLQEKLQSNSKQVLQWRNRVAIALQLVQAIEHIHEKCSPQIVHGDIKSSNVLLDKNFDCK
LCDFGSAKVGFSSMVQPPTMSPRSRQVKMVGSPGYTDPHYLRTGIASKKMDMYGFGVVVL
ELVSGKEAFSAERGEMLVHIAAPLMNEILDSSVDISEDKVRQFLDPRLLRDSLDIDEVKT
MLSVAAVCISSKLSLRPSAAQVADTLIKEIPSLSFLGCGKGV

Other information
Ka divergence:0.369316KaKs divergence:0.593134
GC content 1 (%):42GC content 2 (%):43GC content divergence:0.012
Length 1 (bp):1050Length 2 (bp):1029Length divergence:-0.01
MFE 1 (kcal):-308.45MFE 2 (kcal):-311.02MFE divergence0.004