Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT1G49630-AT3G19170
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):presequence protease 2
Function (paralog2):presequence protease 1

Regulation information
Data set:seedling_Juntawong_2013
Log2 RF fold difference:2.8745715848181
Log2 mRNA fold difference:3.2269816690082
Log2 TE fold difference:-0.31794935239384
Sequences
Protein sequence

MLRSLTCSSTITSTSLFFRSFRQLPRSYLSPSSSTTVVGASGRNIRRLSTLEAAGRRLFL
RRGLKLLSAASRGLNGQFSRLSIRAVATQSAPSSYPGQDEAEKLGFEKVSEEFISECKSK
AVLFKHKKTGCEVMSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPMKEPF
VELLKGSLHTFLNAFTYPDRTCYPVASTNKKDFYNLVDVYLDAVFFPKCVDDVHTFQQEG
WHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGRVTQQALCPENTYGVDSGGDPKDIPK
LTFEKFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLSEYLDMFDASPARDSSKVEPQKLF
SRPRRIVEKYPAGEDGDLKKKHMVCLNWLLSDKPLDLQTQLALGFLDHLMLGTPASPLRK
ILLESGLGEALVNSGMEDELLQPQFSIGLKGVSDDNVQKVEELVMNTLRKLADEGFDTDA
VEASMNTIEFSLRENNTGSSPRGLSLMLQSIAKWIYDMDPFEPLKYEEPLKSLKARIAEK
GSKSVFSPLIEEYILNNPHCVTIEMQPDPEKASLEEAEEKSILEKVKASMTEEDLTELAR
ATEELRLKQETPDPPDALKCVPSLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILY
TEVVFDMGSVKHELLQLIPLFCQSLLEMGTQDLTFVQLNQLIGRKTGGISVYPLTSSVYG
RDDPCSKIIVRGKSMVGRAEDLFNLMNCVLQEVRFTDQQRFKQFVSQSRARMENRLRGSG
QGIAAARMDAMLNVAGWMSEQMGGLSYLEFLHTLEQKVDQDWEGISSSLEEIRRSFLSRN
GCIVNMTADGKSLTNTEKYVGKFLDLLPENPSGELVTWDARLPLRNEAIVIPTQVNYVGK
AGNIYSSGYKLDGSSYVISKHISNTWLWDRVRVSGGAYGGSCDFDSHSGVFSFLSYRDPN
LLKTLDIYDGTGDFLRGLDVDEDTLTKAIIGTIGDVDSYQLPDAKGYTSLLRHLLNVTDE
ERQIRREEILSTSLKDFKEFAEAIDSVSDKGVAVAVASQEDIDAANRERSNFFEVKKAAL

MLRTVSCLASRSSSSLFFRFFRQFPRSYMSLTSSTAALRVPSRNLRRISSPSVAGRRLLL
RRGLRIPSAAVRSVNGQFSRLSVRAVATQPAPLYPDVGQDEAEKLGFEKVSEEFISECKS
KAILFKHKKTGCEVMSVSNEDENKVFGVVFRTPPKDSTGIPHILEHSVLCGSRKYPVKEP
FVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVDDAHTFQQE
GWHYELNDPSEDISYKGVVFNEMKGVYSQPDNILGRIAQQALSPENTYGVDSGGDPKDIP
NLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLRVLSEYLDMFEASPSPNSSKIKFQKL
FSEPVRLVEKYPAGRDGDLKKKHMLCVNWLLSEKPLDLQTQLALGFLDHLMLGTPASPLR
KILLESGLGEALVSSGLSDELLQPQFGIGLKGVSEENVQKVEELIMDTLKKLAEEGFDND
AVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRIAE
EGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELA
RATEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDII
YTEVVFDIGSLKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRKTGGISVYPLTSSVR
GKDEPCSKIIVRGKSMAGRADDLFNLMNCLLQEVQFTDQQRFKQFVSQSRARMENRLRGS
GHGIAAARMDAMLNIAGWMSEQMGGLSYLEFLHTLEKKVDEDWEGISSSLEEIRRSLLAR
NGCIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLVTWDGRLPLRNEAIVIPTQVNYVG
KAGNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDSHSGVFSYLSYRDP
NLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDSYQLPDAKGYSSLLRHLLGVTD
EERQRKREEILTTSLKDFKDFAQAIDVVRDKGVAVAVASAEDIDAANNERSNFFEVKKAL

www.000webhost.com

Other information
Ka divergence:0.100072KaKs divergence:0.111824
GC content 1 (%):43GC content 2 (%):43GC content divergence:0
Length 1 (bp):3243Length 2 (bp):3243Length divergence:0
MFE 1 (kcal):-971.25MFE 2 (kcal):-986.09MFE divergence0.008