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Duplicate gene pair information
Duplicate gene pair:AT1G52380-AT3G15970
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):NUP50 (Nucleoporin 50 kDa) protein
Function (paralog2):NUP50 (Nucleoporin 50 kDa) protein

Regulation information
Data set:seedling-stress_Juntawong_2013
Log2 RF fold difference:-0.73866784081787
Log2 mRNA fold difference:-0.14030031870376
Log2 TE fold difference:-0.50810248506267
Sequences
Protein sequence

MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK
EPSAAPVAASNPFAGIQLVPTTAPASTPVGTNAPLAESKLAPAEAVVEDNQKASDIEEGD
EVDSKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNVCNNAVEGTD
QTDFPLEKDSGGDQAEKKEKEGNGIEEADKNGDNGAFSSFQQHSSNKNAFTGLASTEASG
SSFSFGLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETG
EENEKVAFSADSIMFEYLDGGWKERGKGELKVNVSSNDGKARLVMRAKGNYRLILNASLY
PEMKLANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKA
AEKSALPLKTPENSPTATDT

MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR
TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKETDGD
SKEKSDAIDAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVEGGGAVNKNEDEIKTTM
VTEVAAGEETVKDDNNNSNTVEGSDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGALSS
FHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLFGAS
VATSITTKSTETTTAFPSKQDVSVETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVN
ISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLA
LKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKTPENSPSAEDA

Other information
Ka divergence:0.02843KaKs divergence:-0.242581
GC content 1 (%):43GC content 2 (%):45GC content divergence:0.023
Length 1 (bp):1323Length 2 (bp):1398Length divergence:0.028
MFE 1 (kcal):-396.37MFE 2 (kcal):-406.87MFE divergence0.013