Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT1G63470-AT1G63480
Species:Arabidopsis
Duplication type:TD
Function (paralog1):AT hook motif DNA-binding family protein
Function (paralog2):AT hook motif DNA-binding family protein

Regulation information
Data set:seedling-stress_Juntawong_2013
Log2 RF fold difference:0.28044260728762
Log2 mRNA fold difference:0.16896163266139
Log2 TE fold difference:0.084397483387808
Sequences
Protein sequence

MDGREAMAFPGSHSQFYLQRGVFTNLTPSQVASGLHAPPPPPGMRPMSNPNIHHPQASNP
GPPFSMAEHRHSDFGHSIHMGMASPAAVQPTLQLPPPPSEQPMVKKKRGRPRKYVPDGQV
SLGLSPMPCVSKKSKDSSSMSDPNAPKRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPH
VISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLREPASTTPSLTFEGRFEILSL
GGSYLVNEEGGSKSRTGGLSVSLSGPEGHVIGGGIGMLIAASLVQVVACSFVYGASAKSN
NNNNKTIKQEIKPKQEPTNSEMETTPGSAPEAAASTGQHTPQNFPAQGMSGWPVSGSGSG
RSLDSSRNPLTDIDLTRG

MDGREAMAFPGSHSQYYLQRGAFTNLAPSQVASGLHAPPPHTGLRPMSNPNIHHPQANNP
GPPFSDFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRKRGRPRKYGEPMVSNKSRDS
SPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISIGAGEDIAAKVLSF
SQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGPFEIISFGGSYLVNEEGGSRSRTG
GLSVSLSRPDGSIIAGGVDMLIAANLVQVVACSFVYGARAKTHNNNNKTIRQEKEPNEED
NNSEMETTPGSAAEPAASAGQQTPQNFSSQGIRGWPGSGSGSGRSLDICRNPLTDFDLTR
G

Other information
Ka divergence:0.15495KaKs divergence:0.702511
GC content 1 (%):49GC content 2 (%):48GC content divergence:-0.01
Length 1 (bp):1137Length 2 (bp):1086Length divergence:-0.023
MFE 1 (kcal):-377.29MFE 2 (kcal):-343.86MFE divergence-0.046