Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT2G39870-AT3G55690
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):
Function (paralog2):

Regulation information
Data set:seedling-stress_Juntawong_2013
Log2 RF fold difference:-4.5076073288778
Log2 mRNA fold difference:-4.967886503959
Log2 TE fold difference:0.29411815309495
Sequences
Protein sequence

MSRLLPPHLSVNLPTMEKTTSSELTPTRLGFPNEFPYEFDSPSFSPGFTSPGDSTETEDE
SSDDEEDFLAGLTRRLAPSTQRLPSPLFKSEEKRQVAATSPQSTLSGLGSFSNSGSRSPI
LPSPPAPTSSFRRDNAWDVISAAAGEVARLKLGSYEPHHLPLQTPESLLRRQNAAIHAEL
QHQRLIEQMWLCSAQSRFKLSENRIPRRVVNEEGLFENPRYVRRNNPTWLPPQQAAAPLK
RPSAGTGVFLPRRYPSAAPSDSLKTPVNTPAMLQPKVKPQNLNFDEFTNIVGPRRSQFDY
ECMLARSTVLARQGNFRAVSGGGLPQDWMY

MVAPPIAAASLELPPPFPAVFEQPMEKLTFPNEFPYEFASSTFSTSPEDSTETEDETTDD
EDDFLAGLTRRLALSTQRLSSPSFVTDKSQMKPKVTESTQSGLGSPNGPFSQVPSPPTSP
SREEDSLKVLSAAAGEVAKIKKANFDAKPISYPNPNPNYLTSFPQNVAYYNCYWLWEPHY
PQSQMGIVPNAWHIPPSPVRAFYTLPTAVKSPSTGTGVFLPRKYSNPSDSPKKKSGDGCV
KVVNQQKPKIEVLPVRCKPNSKAGLSTGRSKIDYVAGGGCLKHEKPLLQEWMY

Other information
Ka divergence:0.0233515KaKs divergence:0.157537
GC content 1 (%):50GC content 2 (%):48GC content divergence:-0.02
Length 1 (bp):993Length 2 (bp):882Length divergence:-0.059
MFE 1 (kcal):-310.72MFE 2 (kcal):-239.87MFE divergence-0.129