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Duplicate gene pair information
Duplicate gene pair:AT2G41850-AT3G57510
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):polygalacturonase abscission zone A. thaliana
Function (paralog2):Pectin lyase-like superfamily protein

Regulation information
Data set:shoot_Hsu_2016
Log2 RF fold difference:-2.2118705754343
Log2 mRNA fold difference:-4.5543982203036
Log2 TE fold difference:2.1975060804783
Sequences
Protein sequence

MARCTNLVTVFLLWALLMFSWCKASRISPNVYDHSYKRFKSDSLIKRREDITGLRSFVRA
SLRTPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTG
PCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSC
KRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSP
NTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSK
AFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDKSK
CTTEKSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDRVNIKGGKATCTNANV
VDKGAVLPQCNST

MARCCRHLAVFLCVLLMLSLCKALSSNVDDGYGHEDGSFESDSLLKLNNDDVLSLISSDE
TTLEASTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLVPKGKTYLLKSTRFRG
PCKSLRNFQILGTLSASTKRSDYKDKNHWLILEDVNNLSIDGGSTGIINGNGKTWWQNSC
KIDKSKPCTKAPTALTLYNLKNLNVKNLRVKNAQQIQISIEKCNKVEVSNVEITAPGDSP
NTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISIGSLGDDNSK
AYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDK
CEDQESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVKIKGGTASCKNANV
KNQGTVSPKCS

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Other information
Ka divergence:0.0593623KaKs divergence:0.366295
GC content 1 (%):43GC content 2 (%):41GC content divergence:-0.024
Length 1 (bp):1302Length 2 (bp):1296Length divergence:-0.002
MFE 1 (kcal):-367.64MFE 2 (kcal):-351.2MFE divergence-0.023