Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:AT3G02560-AT5G16130
Species:Arabidopsis
Duplication type:WGD
Function (paralog1):Ribosomal protein S7e family protein
Function (paralog2):Ribosomal protein S7e family protein

Regulation information
Data set:seedling_Juntawong_2013
Log2 RF fold difference:0.40404156343961
Log2 mRNA fold difference:-0.41160909415762
Log2 TE fold difference:0.77985902344913
Sequences
Protein sequence

MYSGQNKIHKDKGVAPTEFEEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKA
VVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLT
SVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGK
DVVFEYPVIEA

MFSAQNKIKKDKNAEPTECEEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKA
VVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLT
SVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGK
DVVFEYPVEA

Other information
Ka divergence:0.103921KaKs divergence:-0.0984615
GC content 1 (%):44GC content 2 (%):45GC content divergence:0.011
Length 1 (bp):576Length 2 (bp):573Length divergence:-0.003
MFE 1 (kcal):-164.9MFE 2 (kcal):-165.2MFE divergence0.001