Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:GRMZM2G060924-GRMZM5G897818
Species:maize
Duplication type:WGD
Function (paralog1):hypothetical protein LOC100193357
Function (paralog2):

Regulation information
Data set:seedling_Lei_2015
Log2 RF fold difference:0.15921390439616
Log2 mRNA fold difference:-0.47560390279939
Log2 TE fold difference:0.89060273239718
Sequences
Protein sequence

MLWVDKYRPKTLDKVTVHDQVAQNLRKFVSEQDCPHLLFYGPSGSGKKTLILALIKQMFG
AGAEKVKLENKTWKIDTGTRTFEIELAMLSSAHHVEMTPSDAGFQDRYVVQEVIKEMAKN
RPIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLHLPAGFAARIAAQSNRNLRRAILFFETCKVQQY
PFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFAVRQKFYELLVNCIPPESILKKLLAE
LLRKLDADLKHEICHWAAHYEHKMRLGSKAIFHLEAFVAKFMSVYKEFLVATFG*

MLWVDKYRPKTLDKVTVHDQVARNLRKFVSEQDCPHLLFYGPSGSGKKTLILALIKQMFG
AGAEKVKLENKTWKIDTGTRTLEIELAMLSSAHHVEMNPSDAGFQDRYVVQEIIKEMAKN
RPIDAKGRRAFKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAVRSR
CLNVRVNAPSEDQIVQVLEFIGKKENLILPAGFAARIAAQSNRNLRRAILFFETCKVQQY
PFTSNQVAPPLDWEQYVSEIATDILTEQSPKRLFDVRQKFYELLVNCIPPESILKKLLAE
LLRKLDADLKYEICRWAAHYEHKMRLGSKAIFHLEAFVAKFMSIYKEFLVATFG*

Other information
Ka divergence:0.408964KaKs divergence:0.609308
GC content 1 (%):46GC content 2 (%):46GC content divergence:0
Length 1 (bp):1065Length 2 (bp):1065Length divergence:0
MFE 1 (kcal):-328.52MFE 2 (kcal):-317.3MFE divergence-0.017