Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:GRMZM2G100288-GRMZM2G006080
Species:maize
Duplication type:WGD
Function (paralog1):hypothetical protein LOC100274007
Function (paralog2):

Regulation information
Data set:seedling-drought_Lei_2015
Log2 RF fold difference:0
Log2 mRNA fold difference:0
Log2 TE fold difference:0
Sequences
Protein sequence

MRAVLLLALLLSACAAAAAQGANSTAFVPRDDIRLDCGAKGQGNDTDGRVWTGDAGSKYA
PPDNLASVASASGQDPSVPQVPYLTARVSASPFTYSFPLGPGRKFLRLHFYPANYTDRDA
ADGLFSVSVAAPGGNLTLLSNFSAYQTAAAITYSYLIREFSVNVSSPTLDLTFTPEKAHP
NAYAFVNGIEVVSSPDLFDISTPNMLAGDGNLQPFPIDAGTAMQTMYRLNVGGQAISPSK
DTGGYRSWDDDSSYIFGASFGVSYPKDSKVTITYPSNVPEYVAPEDVYGTARSMGPDKNV
NMNYNLTWMLEVDAGFMYLIRMHFCEIQYPITKINQRVFNIYINNQTAVKGADVNAWAAV
SGATTLIGTPVYQDYVVSTTGLGAMDLWVALHPNPDSKPQIYDAILNGMEVFKLQLTNGS
LAGLNPVPSVAPVPDGTTKKKSSVGPIVGGVVGGLVVLALGYCCFVICKRRRNAGKDAGM
SDGHSGWLPLSLYGNSHTSSSAKSHTTGSYASSLPSNLCRHFSFAEIKAATNNFDESLIL
GVGGFGKVYRGEVDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEE
KNEMILVYDYMAHGTLREHLYKTQKPPLTWRQRLDICIGAARGLHYLHTGAKHTIIHRDV
KTTNILLDEKWVAKVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVY
SFGVVLFEVLCARPALNPTLPKEEVSLAEWALHCQKKGILDQIVDPYLKGKIAPQCFKKF
AETAEKCVSDQGIDRPSMGDVLWNLEFALQMQEGAEESGSLGCGMSDEGAPLMVGKKDPN
DPSIESSTTTTTTTSISMGDQSVASIDSDGLTPSAVFSQIMNPKGR*

MRALLLLALLLATCAAAAAQAANSTAFVPRDDILLDCGAKGQGNDTDGRVWTGDAGSKFA
PPDNLASVASASGQDPSVPQVPYLTARVSASPFTYSFPLGPGRKFLRLHFYPANYSNHDA
ADGLFSVSVAVPGGKLTLLSNFSAYQTAAAITYSYLIREFSVNVSSATLDLTFTPEKGHP
NAYAFVNGIEVVSSPDLFDISTPNMVTGDGNLQPFPIDAGTAVQTMYRLNVGGQAISPSK
DTGGYRSWDDDTAYIFGAGFGVSYPKDNNVTITYPSNVPEYVAPEDVYGTARSMGPDKNV
NMNYNLTWMLQVDAGFMYLIRLHFCEIQYPITKINQRVFSIYINNQTAVKDADVNAWATM
SGATTLIGTPVYQDYVVTTSGLGAMDLWIALHPNPDSKPQIYDAILNGMEVFKLPLTNGS
LAGLNPIPSVAPMTGGTAKKKSTVGPIVGGVIGGLVVLALGYCCFFVICKRKRSAGKDAG
MSDGHSGWLPLSLYGNSHTSSSAKSHTTGSYASSLPSNLCRHFSFAEIKAATNNFDESLI
LGVGGFGKVYRGEVDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCE
EKNEMILVYDYMAHGTLREHLYKTQKPPLTWRQRLDICIGAARGLHYLHTGAKHTIIHRD
VKTTNILLDEKWVAKVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDV
YSFGVVLFEVLCARPALNPTLPKEEVSLAEWALHCQKKGVLDQIVDPYLKGKIAPQCFKK
FAETAEKCVSDQSIDRPSMGDVLWNLEFALQMQESAEESGSLGCGMSDEGTPLVMVGKKD
PNDPSIESSTTTTTTTSLSMGDQSVASMDSDGLTPSAVFSQIMNPKGR*

Other information
Ka divergence:0KaKs divergence:0
GC content 1 (%):56GC content 2 (%):55GC content divergence:-0.009
Length 1 (bp):2661Length 2 (bp):2667Length divergence:0.001
MFE 1 (kcal):-1041MFE 2 (kcal):-1051.25MFE divergence0.005