Home
Search
Download
Help
Contact





Duplicate gene pair information
Duplicate gene pair:GRMZM2G165919-GRMZM5G872256
Species:maize
Duplication type:WGD
Function (paralog1):galactinol synthase 1
Function (paralog2):LOC606405

Regulation information
Data set:seedling_Lei_2015
Log2 RF fold difference:0.39702350469652
Log2 mRNA fold difference:0.77052878827646
Log2 TE fold difference:-0.28816337025103
Sequences
Protein sequence

MSPELTGKMAAKAAAAAAAVKPATRAYVTFLAGDGDYWKGVVGLAKGLRKVGSAYPLVVA
LLPDVPESHRRILVSQGCILREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYERMVY
LDADIQVFENIDELFELEKGYFYAVMDCFCEKTWSHTPQYRIGYCQQCPDKVAWPTTELG
PPPPLYFNAGMFAHEPSMATAKALLDTLRVTPPTPFAEQDFLNMFFRDQYRPIPNVYNLV
LAMLWRHPENVQLEKVKVVHYCAAGSKPWRFTGKEANMDREDIKTLVNKWWDIYNDEALD
FKGLPLSPADADDEVEAVAKKPLRAALAEAGTVKYVTAPSAA*

MAPELMTAKMTAKAAAAAAAVKPATRAYVTFLAGDGDYWKGVVGLAKGLRKVRSAYPLVV
AVLPDVPESHRRILVSQGCVVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYERMV
YLDADIQVFENIDGLFELEKGYFYAVMDCFCEKTWSHTPQYRIGYCQQCPDKVAWPAATA
ELGPPPSLYFNAGMFVHEPSVATAKALLDTLRVTPPTPFAEQDFLNMFFRDQYRPIPNVY
NLVLAMLWRHPENVQLEKVKVVHYCAAGSKPWRFTGKEANMDREDINALVNKWWDIYNDE
TLDLKGLPSLSPDDDDEVEAVAKKPLRAALAEAGTVKYVTAPSAA*

Other information
Ka divergence:0.13672KaKs divergence:-0.10988
GC content 1 (%):65GC content 2 (%):66GC content divergence:0.008
Length 1 (bp):1029Length 2 (bp):1038Length divergence:0.004
MFE 1 (kcal):-475.2MFE 2 (kcal):-483.1MFE divergence0.008